Wednesday, 8 July 2015

What is the difference between Drugs and chemical probes?



The Basic Difference between Drugs and Chemical Probes

Drugs: Clinical approved chemical substance, which is used to treat diseases and disorders.
Chemical Probes: A chemical substance, which is used to interrogate the unsolved biological problems in order to understand them.
Chemical Probes Applications: Biological target identification, target visualization, target validation, cellular pathway identification, and identification of off target effects.
Generally chemical probes consist three regions


Drug Discovery, Chemical Biology, Chemical probe, target identification, target validation, target visualization, cellular pathway identification, and identification of off target effects, Reactive group (or) war head, Spacer (or) Linker, Reporter Tags, Fluorescent tag, Radioactive tag, Affinity tag, PET, SPECT, Indocyanine green, Biotin-Avidin affinity chromatography, Difference between drug and chemical probe, covalent inhibitor, Phenotype, PK&PD, What is the difference between Drugs and chemical probes?
Fig.1 Chemical Probe
1). Reactive group (or) war head: which is generally act as an electrophile in order to trap a biological nucleophile (thiol, amine, hydroxyl groups in proteins).
2). Spacer (or) Linker: which is generally connects, two units and also enables the cell permeability e.g. peptide chain, poly ethylene glycol chain.
3). Reporter tags: again 3 types based on chemical biology application
a). Fluorescent tag: which is generally report the biological information by visualization method e.g. Indocyanine green by fluorescent microscopy.
b). Radioactive tag: Which is reports the biological distribution of a chemical compound in a particular region e.g. cell or tissue by imaging systems such as PET, SPECT scans.
c). Affinity tag: which is generally used to isolate the particular targeted protein by Biotin-Avidin affinity chromatography.

Table 1: Difference between drug and chemical probe

DrugsChemical probes
Has to fulfill PK&PD
Not necessary
Most of the times single purpose only
Multipurpose
Treat to disease
Disease identification and also reveals nature of target
Phenotype outcome is necessary
Not necessary
Most of the time bind with target reversibly
Most of the time bind with target irreversibly (covalent inhibitor)
Clinical trials essential
Not essential
Not toxic but sometimes show side effects
Might be toxic because of covalent nature
Clinical purpose
Biological investigation purpose

For further reading please find some useful articles below:

The art of the chemical probe URL
Rethinking screening URL
Chemical probes for biological systems URL

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